Blue cats patchwork v1.72 release notes how to#

While the vast majority of the software packages below are accessible on all Compute Canada servers, a few are only available at one site or another due to licensing restrictions.Attempting to load the module for one of these will give you instructions on what to do to obtain access. You may need to be granted access to them by us. Some of the software packages listed below are not immediately usable because they require you to have a license.Docker containers can be converted to Singularity as discussed here. Note that Docker is not available on Compute Canada clusters but Singularity is available by loading the module singularity.

A page discusses symbolic algebra software like Mathematica and Sage.

Blue cats patchwork v1.72 release notes how to#

See the R and Perl pages for instructions on how to do so. We recommend installing them in your personal or group file space.

Similarly, most R or Perl packages are not installed either.

For instructions on how to install or list Python packages, see the Python page. They are instead provided as binary wheels, stored on the Compute Canada systems under /cvmfs//custom/python/wheelhouse/.

Most Python modules are not installed as (Lmod) modules.

Here are a few things to know about the available software: Note that some prerequisite modules are loaded by default. See Using modules for more on how to use the Lmod module system. Except for basic system programs, you access most software by loading a module.